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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015943219.1_cds_XP_016486445.1_77285
CDS Infomation

[gene=LOC107806733] [db_xref=GeneID:107806733] [protein=probable trehalose-phosphate phosphatase H] [protein_id=XP_016486445.1] [location=join(7315..7572,7662..7802,7885..7956,8053..8145,8248..8406,8563..8710,8820..8890,9272..9364,9664..9771)] [gbkey=CDS]
Sequence

ATGACTCAGCAGAATGTGGTAGTGTCCGATCCTAAATCCGGTATTAATTTGACAATACCG
GTGAAGGTATCAAACTCCCCCGCACTGTTCACGAAGCCGCCACCGGCGCCAGGGAGTTGC
ATCACCATTTCAAGAAAGACACTTGTTGAAATAAATAGTGGTCCAAGAATCAATTCTTGG
GTTGACTCAATGAGAGCTTCCTCTCCTACTCGTCACAAGTCCACTAGTCCTCTTTCTGAT
GACATCAATTCTTGGATGGTGCAACATCCATCAGCACTGGATATGTTTGAGCAGATAATA
AGTGCTTCAAAGGGAAAGCAAATAGTAATGTTTTTAGACTATGACGGCACCCTTTCCCCC
ATTGTTGAGGATCCTGATCAAGCTTTCATGTCTGATGCTATGAGAGCAACAGTGAGAAAA
CTTGCTAGATATTTCCCTACTGCAATAGTGAGTGGAAGGTGCAGAGACAAGGTATACAAC
TTTGTACGATTGGCAGAGTTGTACTATGCTGGAAGCCATGGAATGGATATAAAAGGACCA
TCAAAAGGTTCCAAATACAAGAAAGGAGCAGAAGCTGTTCTTTGCCAACCAGCAAGTGAA
TTTCTACCAATGATTGATGAGGTTTACAAAGCACTCATTGATGCAACAAAATCTACAGAA
GGAGTTACAGTGGAGAATAACAAGTTTTGTGCCTCTGTACATTTCCGCCGTGTTGATGAA
AAGAAATGGGGTGAACTAGCACAAGTCGTAAGGTCAGTGCTTAAGGAATATCCAAAGCTG
AGATTAACACAAGGAAGAAAAGTATTTGAGATCCGTCCTACTATTAAATGGGACAAAGGC
AAAGCTCTTGAATTCTTGCTTGAATCTCTTGGATATGCTAACTGTACTGATGTATTTCCT
GTATATATTGGTGATGACCGAACCGATGAAGATGCTTTTAAGGTTCTAAGAGAAAGAGGA
CAGGGTTTTGGCATTCTCGTCTCCAAAATTCCAAAAGACACACATGCATCTTATTCTTTA
CAAGAACCATCTGAGGTTATGGTGTTTCTACGACGCTTGGTAGAGTGGAAAAAGTTGTCA
TTAAGAAGACAGTTTAGAATTCGAAGACAAATTGAAGAGATAAAAGCATCTCTACGGAAC
TAA

Peptide Sequence

PEP ID

XP_016486445.1
PEP Infomation

PREDICTED: probable trehalose-phosphate phosphatase H [Nicotiana tabacum]
Sequence

MTQQNVVVSDPKSGINLTIPVKVSNSPALFTKPPPAPGSCITISRKTLVEINSGPRINSW
VDSMRASSPTRHKSTSPLSDDINSWMVQHPSALDMFEQIISASKGKQIVMFLDYDGTLSP
IVEDPDQAFMSDAMRATVRKLARYFPTAIVSGRCRDKVYNFVRLAELYYAGSHGMDIKGP
SKGSKYKKGAEAVLCQPASEFLPMIDEVYKALIDATKSTEGVTVENNKFCASVHFRRVDE
KKWGELAQVVRSVLKEYPKLRLTQGRKVFEIRPTIKWDKGKALEFLLESLGYANCTDVFP
VYIGDDRTDEDAFKVLRERGQGFGILVSKIPKDTHASYSLQEPSEVMVFLRRLVEWKKLS
LRRQFRIRRQIEEIKASLRN

Transcript Sequence

Gene sequence data has not been registered.